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  5.     <title>UTas ePrints - Detection and mapping of QTL on bovine chromosomes 2 and 5 segregating for live weight, average daily gain and body measurements in Japanese Black Cattle</title>
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  29. <meta content="Detection and mapping of QTL on bovine
  30. chromosomes 2 and 5 segregating for live weight,
  31. average daily gain and body measurements in
  32. Japanese Black Cattle" name="eprints.title" />
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  42. <meta content="QTL mapping, Japanese Black cattle, BTA2, BTA5, body measurements, live weight, daily gain." name="eprints.keywords" />
  43. <meta content="Bovine chromosomes 2 (BTA2) and 5 (BTA5) of purebred, half-sib progeny sired by five Japanese black
  44. bulls were genotyped using microsatellite DNA markers. The data were subjected to linkage analysis for
  45. the detection and mapping of segregating quantitative trait loci (QTL) influencing live weight, average
  46. daily gain and body measurements at weaning. Probability coefficients of inheriting allele 1 or 2 from the
  47. sire at specific chromosomal intervals were computed. The phenotypic data on progeny were regressed on
  48. these probability coefficients in a within-common-parent regression analysis. Fixed effects of sex, parity
  49. and season of birth as well as age as a covariate, were fitted in a linear model to the phenotypic data and
  50. subsequently analysed using QTL Express by generating an F-statistic through permutation tests at
  51. chromosome-wide significance thresholds over 10, 000 iterations at 1 cM intervals. Highly significant
  52. (P<0.01) segregating QTL for body measurements were detected on BTA2 for hip width (1 cM) and chest
  53. depth (8 cM) in Sire Family 1 and pin bone width (16 cM) in Sire Family 3. Other significant QTL (P<0.05)
  54. detected were withers height (3 cM), hip height (4 cM), body length (4 cM), shoulder width (6 cM), lumbar
  55. width (3 cM), thurl width (3 cM) and canon circumference (2 cM) in Sire Family 1, shoulder width (16 cM) in
  56. Sire Family 3 and thurl width (24 cM), pin bone width (19 cM), heart girth (26 cM) and abdominal width (69
  57. cM) in Sire Family 4. Significant (P<0.05) QTL for live weight and average daily gain were detected on BTA2
  58. for birth weight (5 cM) and weaning weight (3 cM) in Sire Family 1 and post-weaning average daily gain (68
  59. cM) in Sire Family 4. BTA 5 contained QTL for birth weight, pin bone width and heart girth in Sire Family 3
  60. that were only suggestive and not significant. Such localization of economically important QTL as
  61. demonstrated in this study, will expedite genetic improvement via marker-assisted selection, gene
  62. introgression and positional cloning in Japanese black cattle." name="eprints.abstract" />
  63. <meta content="2007" name="eprints.date" />
  64. <meta content="published" name="eprints.date_type" />
  65. <meta content="Journal of Cell and Animal Biology" name="eprints.publication" />
  66. <meta content="1" name="eprints.volume" />
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  71. <meta content="http://www.academicjournals.org/JCAB/contents/2007cont/Oct.htm" name="eprints.official_url" />
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  74. nucleotide polymorphism in SPP1 with growth traits and twinning in a
  75. cattle population selected for twinning rate. J. Anim. Sci. 85:341-347.
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  81. RT (2003). Detection of quantitative trait loci for growth and carcass
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  84. Koohmaraie M (2000). Quantitative trait loci affecting growth and
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  86. J. Anim. Sci. 78: 560-569.
  87. Casas E, Stone RT (2006). Putative quantitative trait loci associated
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  266. and crossbred descent. J. Anim. Sci. 83: 2001-2008." name="eprints.referencetext" />
  267. <meta content="Malau-Aduli, A.E.O. and Niibayashi, T. and Kojima, T. and Oshima, K. and Mizoguchi, Y. and Komatsu, M. (2007) Detection and mapping of QTL on bovine chromosomes 2 and 5 segregating for live weight, average daily gain and body measurements in Japanese Black Cattle. Journal of Cell and Animal Biology, 1 (3). pp. 034-043. ISSN 1996-0867" name="eprints.citation" />
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  270. <meta content="Detection and mapping of QTL on bovine
  271. chromosomes 2 and 5 segregating for live weight,
  272. average daily gain and body measurements in
  273. Japanese Black Cattle" name="DC.title" />
  274. <meta content="Malau-Aduli, A.E.O." name="DC.creator" />
  275. <meta content="Niibayashi, T." name="DC.creator" />
  276. <meta content="Kojima, T." name="DC.creator" />
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  287. <meta content="Bovine chromosomes 2 (BTA2) and 5 (BTA5) of purebred, half-sib progeny sired by five Japanese black
  288. bulls were genotyped using microsatellite DNA markers. The data were subjected to linkage analysis for
  289. the detection and mapping of segregating quantitative trait loci (QTL) influencing live weight, average
  290. daily gain and body measurements at weaning. Probability coefficients of inheriting allele 1 or 2 from the
  291. sire at specific chromosomal intervals were computed. The phenotypic data on progeny were regressed on
  292. these probability coefficients in a within-common-parent regression analysis. Fixed effects of sex, parity
  293. and season of birth as well as age as a covariate, were fitted in a linear model to the phenotypic data and
  294. subsequently analysed using QTL Express by generating an F-statistic through permutation tests at
  295. chromosome-wide significance thresholds over 10, 000 iterations at 1 cM intervals. Highly significant
  296. (P<0.01) segregating QTL for body measurements were detected on BTA2 for hip width (1 cM) and chest
  297. depth (8 cM) in Sire Family 1 and pin bone width (16 cM) in Sire Family 3. Other significant QTL (P<0.05)
  298. detected were withers height (3 cM), hip height (4 cM), body length (4 cM), shoulder width (6 cM), lumbar
  299. width (3 cM), thurl width (3 cM) and canon circumference (2 cM) in Sire Family 1, shoulder width (16 cM) in
  300. Sire Family 3 and thurl width (24 cM), pin bone width (19 cM), heart girth (26 cM) and abdominal width (69
  301. cM) in Sire Family 4. Significant (P<0.05) QTL for live weight and average daily gain were detected on BTA2
  302. for birth weight (5 cM) and weaning weight (3 cM) in Sire Family 1 and post-weaning average daily gain (68
  303. cM) in Sire Family 4. BTA 5 contained QTL for birth weight, pin bone width and heart girth in Sire Family 3
  304. that were only suggestive and not significant. Such localization of economically important QTL as
  305. demonstrated in this study, will expedite genetic improvement via marker-assisted selection, gene
  306. introgression and positional cloning in Japanese black cattle." name="DC.description" />
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  313. <meta content="Malau-Aduli, A.E.O. and Niibayashi, T. and Kojima, T. and Oshima, K. and Mizoguchi, Y. and Komatsu, M. (2007) Detection and mapping of QTL on bovine chromosomes 2 and 5 segregating for live weight, average daily gain and body measurements in Japanese Black Cattle. Journal of Cell and Animal Biology, 1 (3). pp. 034-043. ISSN 1996-0867" name="DC.identifier" />
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  420.     <h1 class="ep_tm_pagetitle">Detection and mapping of QTL on bovine chromosomes 2 and 5 segregating for live weight, average daily gain and body measurements in Japanese Black Cattle</h1>
  421.     <p style="margin-bottom: 1em" class="not_ep_block"><span class="person_name">Malau-Aduli, A.E.O.</span> and <span class="person_name">Niibayashi, T.</span> and <span class="person_name">Kojima, T.</span> and <span class="person_name">Oshima, K.</span> and <span class="person_name">Mizoguchi, Y.</span> and <span class="person_name">Komatsu, M.</span> (2007) <xhtml:em>Detection and mapping of QTL on bovine chromosomes 2 and 5 segregating for live weight, average daily gain and body measurements in Japanese Black Cattle.</xhtml:em> Journal of Cell and Animal Biology, 1 (3). pp. 034-043. ISSN 1996-0867</p><p style="margin-bottom: 1em" class="not_ep_block"></p><table style="margin-bottom: 1em" class="not_ep_block"><tr><td valign="top" style="text-align:center"><a onmouseover="EPJS_ShowPreview( event, 'doc_preview_4231' );" href="http://eprints.utas.edu.au/3083/2/Malau-Adulietal2007JCAB.pdf" onmouseout="EPJS_HidePreview( event, 'doc_preview_4231' );"><img alt="[img]" src="http://eprints.utas.edu.au/style/images/fileicons/application_pdf.png" class="ep_doc_icon" border="0" /></a><div class="ep_preview" id="doc_preview_4231"><table><tr><td><img alt="" src="http://eprints.utas.edu.au/3083/thumbnails/2/preview.png" class="ep_preview_image" border="0" /><div class="ep_preview_title">Preview</div></td></tr></table></div></td><td valign="top"><a href="http://eprints.utas.edu.au/3083/2/Malau-Adulietal2007JCAB.pdf"><span class="ep_document_citation">PDF</span></a> - Requires a PDF viewer<br />205Kb</td></tr></table><p style="margin-bottom: 1em" class="not_ep_block">Official URL: <a href="http://www.academicjournals.org/JCAB/contents/2007cont/Oct.htm">http://www.academicjournals.org/JCAB/contents/2007cont/Oct.htm</a></p><div class="not_ep_block"><h2>Abstract</h2><p style="padding-bottom: 16px; text-align: left; margin: 1em auto 0em auto">Bovine chromosomes 2 (BTA2) and 5 (BTA5) of purebred, half-sib progeny sired by five Japanese black&#13;
  422. bulls were genotyped using microsatellite DNA markers. The data were subjected to linkage analysis for&#13;
  423. the detection and mapping of segregating quantitative trait loci (QTL) influencing live weight, average&#13;
  424. daily gain and body measurements at weaning. Probability coefficients of inheriting allele 1 or 2 from the&#13;
  425. sire at specific chromosomal intervals were computed. The phenotypic data on progeny were regressed on&#13;
  426. these probability coefficients in a within-common-parent regression analysis. Fixed effects of sex, parity&#13;
  427. and season of birth as well as age as a covariate, were fitted in a linear model to the phenotypic data and&#13;
  428. subsequently analysed using QTL Express by generating an F-statistic through permutation tests at&#13;
  429. chromosome-wide significance thresholds over 10, 000 iterations at 1 cM intervals. Highly significant&#13;
  430. (P&lt;0.01) segregating QTL for body measurements were detected on BTA2 for hip width (1 cM) and chest&#13;
  431. depth (8 cM) in Sire Family 1 and pin bone width (16 cM) in Sire Family 3. Other significant QTL (P&lt;0.05)&#13;
  432. detected were withers height (3 cM), hip height (4 cM), body length (4 cM), shoulder width (6 cM), lumbar&#13;
  433. width (3 cM), thurl width (3 cM) and canon circumference (2 cM) in Sire Family 1, shoulder width (16 cM) in&#13;
  434. Sire Family 3 and thurl width (24 cM), pin bone width (19 cM), heart girth (26 cM) and abdominal width (69&#13;
  435. cM) in Sire Family 4. Significant (P&lt;0.05) QTL for live weight and average daily gain were detected on BTA2&#13;
  436. for birth weight (5 cM) and weaning weight (3 cM) in Sire Family 1 and post-weaning average daily gain (68&#13;
  437. cM) in Sire Family 4. BTA 5 contained QTL for birth weight, pin bone width and heart girth in Sire Family 3&#13;
  438. that were only suggestive and not significant. Such localization of economically important QTL as&#13;
  439. demonstrated in this study, will expedite genetic improvement via marker-assisted selection, gene&#13;
  440. introgression and positional cloning in Japanese black cattle.</p></div><table style="margin-bottom: 1em" cellpadding="3" class="not_ep_block" border="0"><tr><th valign="top" class="ep_row">Item Type:</th><td valign="top" class="ep_row">Article</td></tr><tr><th valign="top" class="ep_row">Keywords:</th><td valign="top" class="ep_row">QTL mapping, Japanese Black cattle, BTA2, BTA5, body measurements, live weight, daily gain.</td></tr><tr><th valign="top" class="ep_row">Subjects:</th><td valign="top" class="ep_row"><a href="http://eprints.utas.edu.au/view/subjects/270200.html">270000 Biological Sciences &gt; 270200 Genetics</a><br /><a href="http://eprints.utas.edu.au/view/subjects/270207.html">270000 Biological Sciences &gt; 270200 Genetics &gt; 270207 Quantitative Genetics</a><br /><a href="http://eprints.utas.edu.au/view/subjects/300401.html">300000 Agricultural, Veterinary and Environmental Sciences &gt; 300400 Animal Production &gt; 300401 Animal Breeding</a><br /><a href="http://eprints.utas.edu.au/view/subjects/270208.html">270000 Biological Sciences &gt; 270200 Genetics &gt; 270208 Molecular Evolution</a><br /><a href="http://eprints.utas.edu.au/view/subjects/300406.html">300000 Agricultural, Veterinary and Environmental Sciences &gt; 300400 Animal Production &gt; 300406 Animal Growth and Development</a><br /><a href="http://eprints.utas.edu.au/view/subjects/300400.html">300000 Agricultural, Veterinary and Environmental Sciences &gt; 300400 Animal Production</a><br /><a href="http://eprints.utas.edu.au/view/subjects/270800.html">270000 Biological Sciences &gt; 270800 Biotechnology</a></td></tr><tr><th valign="top" class="ep_row">Collections:</th><td valign="top" class="ep_row">UNSPECIFIED</td></tr><tr><th valign="top" class="ep_row">ID Code:</th><td valign="top" class="ep_row">3083</td></tr><tr><th valign="top" class="ep_row">Deposited By:</th><td valign="top" class="ep_row"><span class="ep_name_citation"><span class="person_name">Dr Aduli E.O. Malau-Aduli</span></span></td></tr><tr><th valign="top" class="ep_row">Deposited On:</th><td valign="top" class="ep_row">23 Jan 2008 13:45</td></tr><tr><th valign="top" class="ep_row">Last Modified:</th><td valign="top" class="ep_row">24 Jan 2008 11:02</td></tr><tr><th valign="top" class="ep_row">ePrint Statistics:</th><td valign="top" class="ep_row"><a target="ePrintStats" href="/es/index.php?action=show_detail_eprint;id=3083;">View statistics for this ePrint</a></td></tr></table><p align="right">Repository Staff Only: <a href="http://eprints.utas.edu.au/cgi/users/home?screen=EPrint::View&amp;eprintid=3083">item control page</a></p>
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